sMRIPost-LINC
Installation
Usage Notes
Processing pipeline details
Outputs of
sMRIPost-LINC
Defining standard and nonstandard spaces where data will be resampled
FAQ - Frequently Asked Questions
Developers - API
What’s new
sMRIPost-LINC
Index
Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
I
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
U
|
V
|
W
A
aggr_ses_reports (smripost_linc.config.execution attribute)
atlases (smripost_linc.config.execution attribute)
B
bids_database_dir (smripost_linc.config.execution attribute)
bids_description_hash (smripost_linc.config.execution attribute)
bids_dir (smripost_linc.config.execution attribute)
bids_filters (smripost_linc.config.execution attribute)
boilerplate_only (smripost_linc.config.execution attribute)
C
cifti_output (smripost_linc.config.workflow attribute)
cli (smripost_linc.config.loggers attribute)
country_code (smripost_linc.config.execution attribute)
cpu_count (smripost_linc.config.environment attribute)
crashfile_format (smripost_linc.config.nipype attribute)
D
datasets (smripost_linc.config.execution attribute)
debug (smripost_linc.config.execution attribute)
default (smripost_linc.config.loggers attribute)
dummy_scans (smripost_linc.config.workflow attribute)
dumps() (in module smripost_linc.config)
E
environment (class in smripost_linc.config)
err_on_warn (smripost_linc.config.workflow attribute)
exec_docker_version (smripost_linc.config.environment attribute)
exec_env (smripost_linc.config.environment attribute)
execution (class in smripost_linc.config)
F
free_mem (smripost_linc.config.environment attribute)
from_dict() (in module smripost_linc.config)
fs_license_file (smripost_linc.config.execution attribute)
fs_subjects_dir (smripost_linc.config.execution attribute)
G
get() (in module smripost_linc.config)
get_linked_libs (smripost_linc.config.nipype attribute)
get_plugin() (smripost_linc.config.nipype class method)
I
ignore (smripost_linc.config.workflow attribute)
init() (smripost_linc.config.execution class method)
(smripost_linc.config.loggers class method)
(smripost_linc.config.nipype class method)
init_single_run_wf() (in module smripost_linc.workflows.base)
init_single_subject_wf() (in module smripost_linc.workflows.base)
init_smripost_linc_wf() (in module smripost_linc.workflows.base)
init_spaces() (in module smripost_linc.config)
interface (smripost_linc.config.loggers attribute)
L
layout (smripost_linc.config.execution attribute)
load() (in module smripost_linc.config)
log_dir (smripost_linc.config.execution attribute)
log_level (smripost_linc.config.execution attribute)
loggers (class in smripost_linc.config)
low_mem (smripost_linc.config.execution attribute)
M
md_only_boilerplate (smripost_linc.config.execution attribute)
memory_gb (smripost_linc.config.nipype attribute)
module
smripost_linc.config
smripost_linc.workflows.base
smripost_linc.workflows.freesurfer
smripost_linc.workflows.parcellation
N
nipype (class in smripost_linc.config)
nipype_version (smripost_linc.config.environment attribute)
notrack (smripost_linc.config.execution attribute)
nprocs (smripost_linc.config.nipype attribute)
O
omp_nthreads (smripost_linc.config.nipype attribute)
output_dir (smripost_linc.config.execution attribute)
output_spaces (smripost_linc.config.execution attribute)
overcommit_limit (smripost_linc.config.environment attribute)
overcommit_policy (smripost_linc.config.environment attribute)
P
participant_label (smripost_linc.config.execution attribute)
plugin (smripost_linc.config.nipype attribute)
plugin_args (smripost_linc.config.nipype attribute)
R
remove_unnecessary_outputs (smripost_linc.config.nipype attribute)
reports_only (smripost_linc.config.execution attribute)
resource_monitor (smripost_linc.config.nipype attribute)
run_uuid (smripost_linc.config.execution attribute)
S
sloppy (smripost_linc.config.execution attribute)
smripost_linc.config
module
smripost_linc.workflows.base
module
smripost_linc.workflows.freesurfer
module
smripost_linc.workflows.parcellation
module
stop_on_first_crash (smripost_linc.config.nipype attribute)
T
templateflow_home (smripost_linc.config.execution attribute)
templateflow_version (smripost_linc.config.environment attribute)
to_filename() (in module smripost_linc.config)
track_carbon (smripost_linc.config.execution attribute)
U
utils (smripost_linc.config.loggers attribute)
V
version (smripost_linc.config.environment attribute)
W
work_dir (smripost_linc.config.execution attribute)
workflow (class in smripost_linc.config)
(smripost_linc.config.loggers attribute)
write_graph (smripost_linc.config.execution attribute)